1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0005.g009035

Azfi_s0005.g009035 (GFA2)


Aliases : GFA2

Description : co-chaperone *(Hsp40) & original description: CDS=214-1557


Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0005.g009035
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT5G48030 GFA2 gametophytic factor 2 0.04 OrthoFinder output from all 47 species
Ala_g01859 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05954 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433752g0010 GFA2 Chaperone protein dnaJ GFA2, mitochondrial... 0.03 OrthoFinder output from all 47 species
Pnu_g08090 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11912 No alias co-chaperone (GFA2) involved in gametogenesis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 89 151
IPR001305 HSP_DnaJ_Cys-rich_dom 226 286
IPR002939 DnaJ_C 199 411
No external refs found!