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  5. Azfi_s0005.g008911

Azfi_s0005.g008911 (HTB4)


Aliases : HTB4

Description : histone *(H2B) & original description: CDS=50-517


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0005.g008911

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00067980 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g38274 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07230 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12643 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.85 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Gb_25549 No alias histone (H2B) 0.04 OrthoFinder output from all 47 species
Lfl_g23045 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34350 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Smo182308 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Solyc06g074780.1.1 HTB4, Solyc06g074780 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e004028_P001 HTB11, Zm00001e004028 histone (H2B) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008193 tRNA guanylyltransferase activity IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 17 131
No external refs found!