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  5. Azfi_s0004.g008739

Azfi_s0004.g008739


Description : not classified & original description: CDS=112-2547


Gene families : OG0004055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0004.g008739
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00101050 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g058166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13521 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G011500.1 Ceric.38G011500 not classified & original description: pacid=50580297... 0.06 OrthoFinder output from all 47 species
Cre10.g463300 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g38954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034978001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_29085 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_32615 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g19690.1 LOC_Os03g19690 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10434648g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g00410.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g058730.4.1 Solyc01g058730 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e001468_P001 Zm00001e001468 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!