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  5. Azfi_s0004.g008544

Azfi_s0004.g008544


Description : component *(NDC80) of NDC80 outer kinetochore complex & original description: CDS=55-1824


Gene families : OG0005714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0004.g008544

Target Alias Description ECC score Gene Family Method Actions
AT3G54630 No alias CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80... 0.06 OrthoFinder output from all 47 species
Ala_g33371 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Als_g05052 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.05 OrthoFinder output from all 47 species
Aop_g08964 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021621.13 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 OrthoFinder output from all 47 species
Cre02.g098300 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 OrthoFinder output from all 47 species
Dcu_g10017 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.07 OrthoFinder output from all 47 species
Gb_08872 No alias component NDC80 of NDC80 outer kinetochore complex 0.07 OrthoFinder output from all 47 species
MA_180359g0010 No alias component NDC80 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Mp2g14660.1 No alias component NDC80 of NDC80 outer kinetochore complex 0.07 OrthoFinder output from all 47 species
Msp_g07559 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.06 OrthoFinder output from all 47 species
Nbi_g11443 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009856 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.06 OrthoFinder output from all 47 species
Solyc01g104520.3.1 Solyc01g104520 component NDC80 of NDC80 outer kinetochore complex 0.06 OrthoFinder output from all 47 species
Solyc01g104570.4.1 Solyc01g104570 component NDC80 of NDC80 outer kinetochore complex 0.07 OrthoFinder output from all 47 species
Zm00001e003996_P001 Zm00001e003996 component NDC80 of NDC80 outer kinetochore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 48 170
No external refs found!