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  5. Azfi_s0003.g008139

Azfi_s0003.g008139


Description : E3 ubiquitin ligase *(DRR1) & original description: CDS=62-1507


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g008139
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0062.g035250 No alias E3 ubiquitin ligase *(DRR1) & original description: CDS=522-1847 0.04 OrthoFinder output from all 47 species
Ceric.26G047900.1 Ceric.26G047900 not classified & original description: pacid=50599463... 0.03 OrthoFinder output from all 47 species
Ehy_g13156 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014737001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01017155001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01035722001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os01g08340.1 LOC_Os01g08340 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g08610.1 LOC_Os05g08610 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Sam_g14414 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.06 OrthoFinder output from all 47 species
Smo76977 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc08g067770.3.1 Solyc08g067770 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e016704_P001 Zm00001e016704 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 427 469
No external refs found!