Azfi_s0003.g008109 (U2B'')

Aliases : U2B''

Description : not classified & original description: CDS=1-612

Gene families : OG0003415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003415_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0003.g008109
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
Als_g11070	No alias	component *(U2B) of U2 snRNP complex & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s1836.g107344	No alias	component *(U2B) of U2 snRNP complex & original...	0.13	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021537.24	U2B''	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	OrthoFinder output from all 47 species
Pir_g00324	No alias	component *(U2B) of U2 snRNP complex & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	131	190

External Links

No external refs found!