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  5. Azfi_s0003.g007916

Azfi_s0003.g007916


Description : component *(eL29) of large ribosomal-subunit (LSU) proteome & original description: CDS=1-276


Gene families : OG0004690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007916

Target Alias Description ECC score Gene Family Method Actions
Aop_g28738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68190 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.39G032900.1 Ceric.39G032900 component *(eL29) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Cre03.g207050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
GSVIVT01035023001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_37735 No alias component RPL29 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Len_g34825 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g18113 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Pp3c14_7570V3.1 Pp3c14_7570 Ribosomal L29e protein family 0.07 OrthoFinder output from all 47 species
Pp3c1_34380V3.1 Pp3c1_34380 Ribosomal L29e protein family 0.08 OrthoFinder output from all 47 species
Ppi_g58254 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g17848 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Smo228166 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Spa_g43144 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!