Description : component *(SWIB) of SWI-B chromatin-remodeling complexes & original description: CDS=251-739
Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0003.g007891 | |
Cluster | HCCA: Cluster_90 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G14880 | No alias | SWIB/MDM2 domain superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT4G34290 | No alias | SWIB/MDM2 domain superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g004192 | CHC1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g12934 | No alias | component *(SWIB) of SWI-B chromatin-remodeling... | 0.06 | OrthoFinder output from all 47 species | |
Len_g26992 | No alias | component *(SWIB) of SWI-B chromatin-remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g107330.4.1 | Solyc01g107330 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
Spa_g30391 | No alias | component *(SWIB) of SWI-B chromatin-remodeling... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004797 | thymidine kinase activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
CC | GO:0009507 | chloroplast | IEP | HCCA |
CC | GO:0009536 | plastid | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | HCCA |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | HCCA |
MF | GO:0019206 | nucleoside kinase activity | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003121 | SWIB_MDM2_domain | 169 | 241 |
No external refs found! |