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  5. Azfi_s0003.g007727

Azfi_s0003.g007727 (DEF2, ATDEF2, PDF1B)


Aliases : DEF2, ATDEF2, PDF1B

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: CDS=1-627


Gene families : OG0005303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007727
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT5G14660 DEF2, ATDEF2, PDF1B peptide deformylase 1B 0.03 OrthoFinder output from all 47 species
Ceric.21G047700.1 DEF2, ATDEF2,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000507.33 DEF2, ATDEF2, PDF1B Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre01.g039750 DEF2, ATDEF2, PDF1B Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dcu_g20050 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Lfl_g05284 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.05 OrthoFinder output from all 47 species
Mp5g20960.1 DEF2, ATDEF2, PDF1B formylmethionine deformylase (PDF) 0.02 OrthoFinder output from all 47 species
Pir_g12840 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013940 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Sam_g28123 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0042586 peptide deformylase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 28 175
No external refs found!