Azfi_s0003.g007619 (PUB13, ATPUB13)

Aliases : PUB13, ATPUB13

Description : not classified & original description: CDS=1-951

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0003.g007619

Target	Alias	Description	ECC score	Gene Family Method
AT3G01400	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G54850	PUB14, ATPUB14	plant U-box 14	0.03	OrthoFinder output from all 47 species
Adi_g057744	PUB14, ATPUB14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082530	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g10750	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g17103	PUB13, ATPUB13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009347001	No alias	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os06g01304.1	PUB14, ATPUB14,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
LOC_Os12g38210.1	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Ore_g15817	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g16189	PUB12, AtPUB12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g07352	ATPUB17, PUB17	E3 ubiquiTin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g39824	ATPUB17, PUB17	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	HCCA
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	HCCA
BP	GO:0019915	lipid storage	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	169	239

External Links

No external refs found!