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  5. Azfi_s0003.g007527

Azfi_s0003.g007527


Description : not classified & original description: CDS=352-2949


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007527

Target Alias Description ECC score Gene Family Method Actions
Adi_g088948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013844 No alias not classified & original description: CDS=158-3016 0.06 OrthoFinder output from all 47 species
Cba_g15481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G024600.1 Ceric.35G024600 not classified & original description: pacid=50580868... 0.04 OrthoFinder output from all 47 species
GSVIVT01021983001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g51140.1 LOC_Os02g51140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16127 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g008370.3.1 Solyc08g008370 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 291.0) 0.02 OrthoFinder output from all 47 species
Zm00001e020733_P001 Zm00001e020733 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 476 510
IPR013989 Dev_and_cell_death_domain 33 163
No external refs found!