Solyc08g016720.1.1 (Solyc08g016720.1)


Aliases : Solyc08g016720.1

Description : 17.1.1.1.10 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase Encodes 9-<i>cis</i>-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. nine-cis-epoxycarotenoid dioxygenase 3 (NCED3)


Gene families : OG_01_0000949 (Gene family) Phylogenetic Tree(s): OG0000949_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g016720.1.1
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.03 Gene family
LOC_Os03g44380 Os03g0645900 17.1.1.1.10 hormone metabolism.abscisic... 0.02 Gene family
LOC_Os04g04230 Os04g0131800 17.1.1.1.10 hormone metabolism.abscisic... 0.01 Gene family
LOC_Os07g05940 Os07g0154100 17.1.1.1.10 hormone metabolism.abscisic... 0.02 Gene family
MA_10428505g0020 No alias 17.1.1.1.10 hormone metabolism.abscisic... 0.01 Gene family
Zm00001d018819 GRMZM2G417954 17.1.1.1.10 hormone metabolism.abscisic... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 110 572
No external refs found!