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  5. Azfi_s0002.g001624

Azfi_s0002.g001624


Description : not classified & original description: CDS=110-1882


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0002.g001624

Target Alias Description ECC score Gene Family Method Actions
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g08429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37336 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34133.t1 Aspi01Gene34133 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene46643.t1 Aspi01Gene46643 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.1 OrthoFinder output from all 47 species
Cba_g01506 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g25477 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g12101 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.06 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Lfl_g16404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03214 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16492 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo181046 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.05 OrthoFinder output from all 47 species
Spa_g26887 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g45656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29210 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 321 367
IPR002885 Pentatricopeptide_repeat 220 266
IPR002885 Pentatricopeptide_repeat 422 469
IPR002885 Pentatricopeptide_repeat 523 567
IPR002885 Pentatricopeptide_repeat 119 166
IPR002885 Pentatricopeptide_repeat 81 100
IPR002885 Pentatricopeptide_repeat 295 317
IPR002885 Pentatricopeptide_repeat 396 417
No external refs found!