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  5. Azfi_s0002.g001594

Azfi_s0002.g001594


Description : not classified & original description: CDS=186-1532


Gene families : OG0000880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0002.g001594
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT4G17520 No alias Hyaluronan / mRNA binding family 0.06 OrthoFinder output from all 47 species
Adi_g025028 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42293.t1 Aspi01Gene42293 regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g41880.1 LOC_Os01g41880 RGG repeats nuclear RNA binding protein A (Fragment)... 0.06 OrthoFinder output from all 47 species
Solyc01g090190.3.1 Solyc01g090190 RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e019958_P002 Zm00001e019958 RGG repeats nuclear RNA binding protein A (Fragment)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
InterPro domains Description Start Stop
IPR006861 HABP4_PAIRBP1-bd 204 321
IPR019084 Stm1-like_N 1 65
No external refs found!