Azfi_s0002.g001193


Description : not classified & original description: CDS=1-1761


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0002.g001193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
Aev_g18096 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46643.t1 Aspi01Gene46643 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g18372 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45870 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14311 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g39201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15474 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19088 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29969 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30631 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005702 No alias not classified & original description: CDS=46-1077 0.02 OrthoFinder output from all 47 species
Sam_g13892 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo431043 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo77659 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Tin_g17146 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 288 308
IPR002885 Pentatricopeptide_repeat 418 445
IPR002885 Pentatricopeptide_repeat 489 513
IPR002885 Pentatricopeptide_repeat 457 479
IPR002885 Pentatricopeptide_repeat 213 261
IPR002885 Pentatricopeptide_repeat 91 137
IPR002885 Pentatricopeptide_repeat 313 361
No external refs found!