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  5. Azfi_s0002.g001138

Azfi_s0002.g001138


Description : EC_6.2 ligase forming carbon-sulfur bond & original description: CDS=1-1170


Gene families : OG0004750 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0002.g001138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00055000 evm_27.TU.AmTr_v1... Cellular respiration.tricarboxylic acid... 0.04 OrthoFinder output from all 47 species
AT5G08300 No alias Succinyl-CoA ligase, alpha subunit 0.04 OrthoFinder output from all 47 species
Dcu_g02806 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g00388 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
LOC_Os07g38970.1 LOC_Os07g38970 subunit alpha of succinyl-CoA ligase heterodimer 0.06 OrthoFinder output from all 47 species
Mp7g15650.1 No alias subunit alpha of succinyl-CoA ligase heterodimer 0.02 OrthoFinder output from all 47 species
Nbi_g06652 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Pp3c6_7570V3.1 Pp3c6_7570 Succinyl-CoA ligase, alpha subunit 0.01 OrthoFinder output from all 47 species
Solyc01g007910.3.1 Solyc01g007910 subunit alpha of succinyl-CoA ligase heterodimer 0.03 OrthoFinder output from all 47 species
Solyc02g005350.3.1 Solyc02g005350 subunit alpha of succinyl-CoA ligase heterodimer 0.03 OrthoFinder output from all 47 species
Zm00001e010616_P002 Zm00001e010616 subunit alpha of succinyl-CoA ligase heterodimer 0.04 OrthoFinder output from all 47 species
Zm00001e035350_P001 Zm00001e035350 subunit alpha of succinyl-CoA ligase heterodimer 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR003781 CoA-bd 42 135
IPR009400 TFIIH_TTDA/Tfb5 333 388
IPR005811 CoA_ligase 188 309
No external refs found!