1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0001.g000890

Azfi_s0001.g000890 (TOM40)


Aliases : TOM40

Description : channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system & original description: CDS=66-1031


Gene families : OG0002328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002328_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000890
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0092.g042988 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Dac_g04134 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Dac_g36688 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Ehy_g09714 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
LOC_Os01g16910.1 TOM40, LOC_Os01g16910 component Tom40 of outer mitochondrion membrane TOM... 0.02 OrthoFinder output from all 47 species
MA_17884g0010 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.01 OrthoFinder output from all 47 species
Msp_g08391 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Nbi_g00868 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Sam_g07859 No alias channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Smo403082 TOM40 Protein translocation.mitochondrion.outer mitochondrion... 0.02 OrthoFinder output from all 47 species
Spa_g48614 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 62 334
No external refs found!