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  5. Azfi_s0001.g000860

Azfi_s0001.g000860 (PUM1, APUM1)


Aliases : PUM1, APUM1

Description : not classified & original description: CDS=178-3375


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000860

Target Alias Description ECC score Gene Family Method Actions
Adi_g011592 APUM2, PUM2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075414 APUM2, PUM2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06713 PUM1, APUM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25094 PUM1, APUM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016507001 PUM1, APUM1 Pumilio homolog 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ore_g02142 APUM4, PUM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11332 PUM1, APUM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 1000 1029
IPR001313 Pumilio_RNA-bd_rpt 737 771
IPR001313 Pumilio_RNA-bd_rpt 774 806
IPR001313 Pumilio_RNA-bd_rpt 881 916
IPR001313 Pumilio_RNA-bd_rpt 920 951
IPR001313 Pumilio_RNA-bd_rpt 851 876
IPR001313 Pumilio_RNA-bd_rpt 954 988
IPR001313 Pumilio_RNA-bd_rpt 809 842
IPR012940 NABP 359 567
IPR012940 NABP 581 731
No external refs found!