1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0001.g000854

Azfi_s0001.g000854


Description : not classified & original description: CDS=1-1434


Gene families : OG0001618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000854
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00082420 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aob_g07918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020452_P002 Zm00001e020452 DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 235 341
IPR011545 DEAD/DEAH_box_helicase_dom 7 189
No external refs found!