Azfi_s0001.g000730


Description : not classified & original description: CDS=1-2529


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000730

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00062930 EMB2261,... Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06555 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30126 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g28530 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04185.t1 Aspi01Gene04185 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34816.t1 Aspi01Gene34816 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35079.t1 Aspi01Gene35079 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37377.t1 Aspi01Gene37377 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene38233.t1 Aspi01Gene38233 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene51735.t1 Aspi01Gene51735 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52571.t1 Aspi01Gene52571 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0076.g037861 No alias not classified & original description: CDS=1-1125 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043166 No alias not classified & original description: CDS=1-1980 0.03 OrthoFinder output from all 47 species
Azfi_s0143.g051490 No alias not classified & original description: CDS=1-2688 0.01 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.01 OrthoFinder output from all 47 species
Azfi_s0345.g065835 No alias not classified & original description: CDS=1-1926 0.01 OrthoFinder output from all 47 species
Azfi_s0485.g073410 No alias not classified & original description: CDS=1-1641 0.04 OrthoFinder output from all 47 species
Cba_g03391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43238 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08223 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17095 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g17164 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35824 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35896 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19440 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.09 OrthoFinder output from all 47 species
Len_g02911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25603 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03214 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12146 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22644 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g30589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04545 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g49012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo132819 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Smo134538 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Tin_g03388 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 481 529
IPR002885 Pentatricopeptide_repeat 176 221
IPR002885 Pentatricopeptide_repeat 583 632
IPR002885 Pentatricopeptide_repeat 378 425
IPR002885 Pentatricopeptide_repeat 72 119
IPR002885 Pentatricopeptide_repeat 353 375
IPR002885 Pentatricopeptide_repeat 251 273
IPR002885 Pentatricopeptide_repeat 455 477
IPR002885 Pentatricopeptide_repeat 48 69
IPR002885 Pentatricopeptide_repeat 689 716
IPR002885 Pentatricopeptide_repeat 661 684
IPR002885 Pentatricopeptide_repeat 764 785
IPR002885 Pentatricopeptide_repeat 279 309
No external refs found!