Azfi_s0001.g000621


Description : ssDNA-binding protein *(OSB) & original description: CDS=97-654


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000621

Target Alias Description ECC score Gene Family Method Actions
AT4G08210 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Aob_g03394 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27919 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g02910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07015 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16003 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28526 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28532 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29706 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29955 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37119 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37237 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67891 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68806 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69569 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04772.t1 CRR22, Aspi01Gene04772 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13090.t1 Aspi01Gene13090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31466.t1 Aspi01Gene31466 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66060.t1 Aspi01Gene66060 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.01 OrthoFinder output from all 47 species
Azfi_s0009.g011983 No alias not classified & original description: CDS=1-2745 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g012931 No alias not classified & original description: CDS=1-3024 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025537 No alias ssDNA-binding protein *(OSB) & original description: CDS=167-2242 0.02 OrthoFinder output from all 47 species
Azfi_s0039.g026394 OTP86 not classified & original description: CDS=1-2238 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044009 No alias not classified & original description: CDS=1-2178 0.02 OrthoFinder output from all 47 species
Azfi_s0115.g046284 No alias not classified & original description: CDS=76-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0128.g048815 No alias not classified & original description: CDS=1-1722 0.03 OrthoFinder output from all 47 species
Azfi_s0151.g053374 No alias ssDNA-binding protein *(OSB) & original description: CDS=217-2670 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053510 No alias not classified & original description: CDS=1-2550 0.02 OrthoFinder output from all 47 species
Azfi_s0162.g054179 No alias not classified & original description: CDS=1-2562 0.02 OrthoFinder output from all 47 species
Azfi_s0175.g055972 OTP86 not classified & original description: CDS=1-2742 0.02 OrthoFinder output from all 47 species
Azfi_s0242.g059832 No alias not classified & original description: CDS=1-2646 0.02 OrthoFinder output from all 47 species
Azfi_s0257.g060586 No alias not classified & original description: CDS=1-3168 0.02 OrthoFinder output from all 47 species
Azfi_s0371.g067098 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2013 0.02 OrthoFinder output from all 47 species
Azfi_s0425.g069243 No alias not classified & original description: CDS=144-3230 0.02 OrthoFinder output from all 47 species
Cba_g06571 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29935 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G084700.1 Ceric.12G084700 not classified & original description: pacid=50602071... 0.02 OrthoFinder output from all 47 species
Ceric.19G003900.1 Ceric.19G003900 not classified & original description: pacid=50575192... 0.01 OrthoFinder output from all 47 species
Ceric.36G001100.1 Ceric.36G001100 not classified & original description: pacid=50568746... 0.02 OrthoFinder output from all 47 species
Dcu_g16812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
Len_g03710 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g18879 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06850 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Lfl_g25515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05803 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19898 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21793 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30522 OTP81 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47042 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37474 LOI1, MEF11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02831 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13390 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13499 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g17878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60415 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g63641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63824 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31582 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009203 No alias not classified & original description: CDS=323-3121 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016986 No alias not classified & original description: CDS=1-1749 0.02 OrthoFinder output from all 47 species
Sam_g03099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13764 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g40203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50534 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g52122 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.01 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Spa_g06017 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20079 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g20467 CRR2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g22704 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27591 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27917 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28099 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39088 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44754 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g47078 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50618 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g53370 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20961 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 131 153
IPR002885 Pentatricopeptide_repeat 159 185
No external refs found!