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Description : MADS/AGL-type transcription factor & original description: CDS=1-189
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0001.g000595 | |
| Cluster | HCCA: Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00254030 | SHP2, AGL5,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G23260 | AGL32, TT16, ABS | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20861 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07001 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene05601.t1 | STK, AGL11,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene15820.t1 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene17826.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene49756.t1 | STK, AGL11,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene54037.t1 | Aspi01Gene54037 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026344 | AGL21 | not classified & original description: CDS=1-522 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s2186.g109823 | No alias | not classified & original description: CDS=5-496 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g09207 | AGL13 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g20775 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19022 | AGL13 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010221001 | AGL62 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16301 | STK, AGL11 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g11614.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g20789 | SHP2, AGL5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g41375 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_1090469g0010 | SOC1, AGL20, ATSOC1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_16629g0010 | ANR1, AGL44 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_347547g0010 | SOC1, AGL20, ATSOC1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000222 | AGL33 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0271.g027022 | AGL7, AP1 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g47836 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g092950.3.1 | SOC1, AGL20,... | MADS-box protein SOC1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g091550.2.1 | AGL21, Solyc02g091550 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g012020.4.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g069430.3.1 | AGL8, FUL, Solyc06g069430 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000167_P005 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | HCCA |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006595 | polyamine metabolic process | IEP | HCCA |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | HCCA |
| BP | GO:0006597 | spermine biosynthetic process | IEP | HCCA |
| BP | GO:0008215 | spermine metabolic process | IEP | HCCA |
| BP | GO:0008216 | spermidine metabolic process | IEP | HCCA |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | HCCA |
| BP | GO:0008643 | carbohydrate transport | IEP | HCCA |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | HCCA |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0019825 | oxygen binding | IEP | HCCA |
| MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | HCCA |
| BP | GO:0034219 | carbohydrate transmembrane transport | IEP | HCCA |
| BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043546 | molybdopterin cofactor binding | IEP | HCCA |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0098657 | import into cell | IEP | HCCA |
| BP | GO:0098704 | carbohydrate import across plasma membrane | IEP | HCCA |
| BP | GO:0098739 | import across plasma membrane | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |