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  5. Azfi_s0001.g000482

Azfi_s0001.g000482 (NRS/ER, UER1)


Aliases : NRS/ER, UER1

Description : dTDP-rhamnose synthase *(NRS-ER) & original description: CDS=31-909


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000482
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Ala_g09414 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G035200.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.17 ATRHM2, RHM2,... Trifunctional UDP-glucose... 0.02 OrthoFinder output from all 47 species
Cre02.g083800 RHM1, ROL1, ATRHM1 Trifunctional UDP-glucose... 0.03 OrthoFinder output from all 47 species
Cre09.g387171 NRS/ER, UER1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Mp1g04880.1 NRS/ER, UER1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Msp_g09587 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12116 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12352 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g09373 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439393 NRS/ER, UER1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Solyc08g080140.4.1 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species
Solyc10g007480.4.1 RHM1, ROL1,... UDP-L-rhamnose synthase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 20 192
No external refs found!