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  5. Azfi_s0001.g000349

Azfi_s0001.g000349 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: CDS=1-660


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000349
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Als_g06841 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41901.t1 RAT5, HTA1,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01576 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.4 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Dde_g15481 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g38640.1 HTA12, LOC_Os05g38640 histone (H2A) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 168 200
IPR007125 Histone_H2A/H2B/H3 70 165
No external refs found!