- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : ribonuclease *(RNC1) & original description: CDS=41-2044
Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0001.g000334 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G37510 | No alias | Ribonuclease III family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g051860 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g36445 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08305 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08197 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g30224 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000148001 | No alias | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g59510.1 | LOC_Os01g59510 | ribonuclease (RNC1) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g38817 | No alias | ribonuclease *(RNC1) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g18587 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g17066 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13594 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017009 | No alias | ribonuclease *(RNC1) & original description: CDS=54-1502 | 0.03 | OrthoFinder output from all 47 species | |
| Smo145591 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g080040.3.1 | Solyc10g080040 | ribonuclease (RNC1) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019511_P001 | Zm00001e019511 | ribonuclease (RNC1) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | HCCA |
| CC | GO:0005886 | plasma membrane | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
| BP | GO:0006817 | phosphate ion transport | IEP | HCCA |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | HCCA |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |