Azfi_s0001.g000329 (EMB1144)


Aliases : EMB1144

Description : EC_4.2 carbon-oxygen lyase & original description: CDS=200-1519


Gene families : OG0003723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003723_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000329
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Aev_g09563 EMB1144 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16506 EMB1144 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005841 EMB1144 EC_4.2 carbon-oxygen lyase & original description: CDS=36-1460 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEA Interproscan
BP GO:0009073 aromatic amino acid family biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004615 phosphomannomutase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR000453 Chorismate_synth 63 410
No external refs found!