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  5. Azfi_s0001.g000127

Azfi_s0001.g000127 (ATSPO11-1)


Aliases : ATSPO11-1

Description : not classified & original description: CDS=275-1324


Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000127
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G63990 SPO11-2 sporulation 11-2 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008123 SPO11-2 component a *(SPO11) of meiotic topoisomerase-VI complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01014659001 ATSPO11-1 Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006259 DNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 62 123
No external refs found!