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  5. Ceric.39G041400.1

Ceric.39G041400.1 (Ceric.39G041400)


Aliases : Ceric.39G041400

Description : E3 ubiquitin ligase & original description: pacid=50583477 polypeptide=Ceric.39G041400.1.p locus=Ceric.39G041400 ID=Ceric.39G041400.1.v2.1 annot-version=v2.1


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.39G041400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Ala_g18515 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01768 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031639 No alias E3 ubiquitin ligase & original description: CDS=1-1089 0.03 OrthoFinder output from all 47 species
Cre09.g400738 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Ehy_g16213 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Mp8g15410.1 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Nbi_g10536 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000908 No alias E3 ubiquitin ligase & original description: CDS=1-1032 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019260 No alias E3 ubiquitin ligase & original description: CDS=708-1604 0.03 OrthoFinder output from all 47 species
Sam_g50720 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g091230.4.1 Solyc02g091230 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc03g116030.4.1 Solyc03g116030 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc04g007600.4.1 Solyc04g007600 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 191 300
IPR011016 Znf_RING-CH 139 184
No external refs found!