Solyc08g008305.1.1 (Solyc08g008305.1)


Aliases : Solyc08g008305.1

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g008305.1.1
Cluster HCCA cluster: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT1G43160 RAP2.6 related to AP2 6 0.03 Gene family
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G46310 CRF5 cytokinin response factor 5 0.03 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.03 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01017315001 No alias No description available 0.03 Gene family
GSVIVT01036228001 No alias No description available 0.04 Gene family
LOC_Os02g10760 Os02g0202000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.03 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.03 Gene family
MA_116185g0010 No alias No description available 0.03 Gene family
MA_896002g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.02 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.03 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d008968 GRMZM2G044077 No description available 0.03 Gene family
Zm00001d009573 GRMZM2G021790 No description available 0.03 Gene family
Zm00001d020043 GRMZM2G363052 No description available 0.02 Gene family
Zm00001d020267 GRMZM2G141679 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d036298 GRMZM2G119865 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d044857 GRMZM5G852704 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 131 180
No external refs found!