1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.38G041200.1

Ceric.38G041200.1 (Ceric.38G041200)


Aliases : Ceric.38G041200

Description : transcription termination factor *(TTF1) & original description: pacid=50580312 polypeptide=Ceric.38G041200.1.p locus=Ceric.38G041200 ID=Ceric.38G041200.1.v2.1 annot-version=v2.1


Gene families : OG0003814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003814_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.38G041200.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G41020 No alias myb family transcription factor 0.04 OrthoFinder output from all 47 species
Dac_g38685 No alias transcription termination factor *(TTF1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g48895 No alias transcription termination factor *(TTF1) & original... 0.03 OrthoFinder output from all 47 species
Gb_06266 No alias transcription termination factor (TTF1). transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os06g19980.1 LOC_Os06g19980 transcription termination factor (TTF1). transcription... 0.05 OrthoFinder output from all 47 species
Smo419617 AtMYB50, MYB50 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc03g019800.4.1 Solyc03g019800 transcription termination factor (TTF1). transcription... 0.08 OrthoFinder output from all 47 species
Zm00001e021684_P001 Zm00001e021684 transcription termination factor (TTF1). transcription... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!