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  5. Ceric.38G009100.1

Ceric.38G009100.1 (RPL16, Ceric.38G009100)


Aliases : RPL16, Ceric.38G009100

Description : component *(uL16c) of large plastid ribosomal-subunit proteome & original description: pacid=50579773 polypeptide=Ceric.38G009100.1.p locus=Ceric.38G009100 ID=Ceric.38G009100.1.v2.1 annot-version=v2.1


Gene families : OG0004825 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.38G009100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02809p00000680 evm_27.TU.AmTr_v1... 50S ribosomal protein L16, chloroplastic OS=Amborella trichopoda 0.07 OrthoFinder output from all 47 species
ATCG00790 RPL16 ribosomal protein L16 0.11 OrthoFinder output from all 47 species
ATMG00080 RPL16 ribosomal protein L16 0.07 OrthoFinder output from all 47 species
Aob_g10973 RPL16 component *(uL16m) of large mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aop_g00855 RPL16 component *(uL16m) of large mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ceric.29G004300.1 RPL16, Ceric.29G004300 not classified & original description: pacid=50624823... 0.11 OrthoFinder output from all 47 species
Ceric.35G023300.1 RPL16, Ceric.35G023300 not classified & original description: pacid=50581973... 0.02 OrthoFinder output from all 47 species
Cre06.g278224 No alias 60S ribosomal protein L16, mitochondrial OS=Prototheca... 0.03 OrthoFinder output from all 47 species
Gb_05912 RPL16 component mtRPL16 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Gb_40955 RPL16 50S ribosomal protein L16, chloroplastic... 0.06 OrthoFinder output from all 47 species
LOC_Os01g57958.1 LOC_Os01g57958 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.06 OrthoFinder output from all 47 species
LOC_Os04g16826.1 LOC_Os04g16826 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.06 OrthoFinder output from all 47 species
LOC_Os10g21344.1 LOC_Os10g21344 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.06 OrthoFinder output from all 47 species
LOC_Os12g34128.1 LOC_Os12g34128 component mtRPL16 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Mp1g22400.1 No alias 60S ribosomal protein L16, mitochondrial OS=Marchantia... 0.05 OrthoFinder output from all 47 species
Ore_g00369 RPL16 component *(uL16c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s3366.g028729 RPL16 component *(uL16c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s3471.g028812 RPL16 component *(uL16c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sam_g33347 No alias component *(uL16m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Smo137887 RPL16 50S ribosomal protein L16, chloroplastic OS=Huperzia lucidula 0.06 OrthoFinder output from all 47 species
Solyc00g500032.1.1 RPL16, Solyc00g500032 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.04 OrthoFinder output from all 47 species
Solyc00g500077.1.1 RPL16, Solyc00g500077 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.04 OrthoFinder output from all 47 species
Solyc10g006910.3.1 RPL16, Solyc10g006910 50S ribosomal protein L16, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!