Solyc08g007230.2.1 (Solyc08g007230.2)


Aliases : Solyc08g007230.2

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g007230.2.1
Cluster HCCA cluster: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.04 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.02 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.03 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01001089001 No alias No description available 0.04 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01016684001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01032961001 No alias No description available 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.02 Gene family
GSVIVT01035852001 No alias No description available 0.01 Gene family
GSVIVT01035911001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.02 Gene family
LOC_Os02g09650 Os02g0189500 No description available 0.02 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.03 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g47590 Os06g0691100 No description available 0.02 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.02 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.02 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_113446g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_116185g0010 No alias No description available 0.01 Gene family
MA_132427g0010 No alias No description available 0.02 Gene family
MA_179692g0020 No alias No description available 0.02 Gene family
MA_18454g0020 No alias No description available 0.02 Gene family
MA_2040g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_269802g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_411387g0010 No alias No description available 0.01 Gene family
MA_42369g0010 No alias No description available 0.02 Gene family
MA_9905g0010 No alias No description available 0.03 Gene family
Solyc01g090300.3.1 Solyc01g090300.3 No description available 0.02 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.02 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.03 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.03 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.03 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.03 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.03 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.02 Gene family
Solyc06g054630.2.1 Solyc06g054630.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.03 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.01 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.04 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.03 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d015759 GRMZM2G085678 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.05 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d023535 GRMZM2G544539 No description available 0.02 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.03 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027929 No alias No description available 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.02 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.03 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d044950 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 91 141
No external refs found!