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  5. Ceric.37G068500.1

Ceric.37G068500.1 (LHCB5, Ceric.37G068500)


Aliases : LHCB5, Ceric.37G068500

Description : component *(LHCb5) of LHC-II complex & original description: pacid=50616810 polypeptide=Ceric.37G068500.1.p locus=Ceric.37G068500 ID=Ceric.37G068500.1.v2.1 annot-version=v2.1


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.37G068500.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Ala_g06137 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23954 LHCB1.4, LHB1B1 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g69021 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G083300.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
LOC_Os09g17740.1 LHCB1.5, LHB1B2,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g06720.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Ore_g15308 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35944 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Smo75552 LHCB2.3, LHCB2, LHCB2.4 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Solyc08g067320.3.1 LHCB1.5, LHB1B2,... Chlorophyll a-b binding protein 3A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc08g067330.1.1 CAB3, AB180,... Chlorophyll a-b binding protein 16, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 78 238
No external refs found!