Solyc08g007130.3.1 (Solyc08g007130.3)


Aliases : Solyc08g007130.3

Description : 2.2.2.1.2 major CHO metabolism.degradation.starch.starch cleavage.beta amylase Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected). chloroplast beta-amylase (CT-BMY)


Gene families : OG_01_0000401 (Gene family) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g007130.3.1
Cluster HCCA cluster: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT5G18670 BAM9, BMY3 beta-amylase 3 0.04 Gene family
LOC_Os07g35880 Os07g0543100 2.2.2.1.2 major CHO metabolism.degradation.starch.starch... 0.02 Gene family
Solyc08g077530.3.1 Solyc08g077530.3 2.2.2.1.2 major CHO metabolism.degradation.starch.starch... 0.03 Gene family
Zm00001d006539 GRMZM5G803981 2.2.2.1.2 major CHO metabolism.degradation.starch.starch... 0.02 Gene family
Zm00001d029983 GRMZM2G007939 2.2.2.1.2 major CHO metabolism.degradation.starch.starch... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan
MF GO:0016161 beta-amylase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 84 501
No external refs found!