Ceric.36G065300.1 (NFD1, Ceric.36G065300)


Aliases : NFD1, Ceric.36G065300

Description : component *(bL21m) of large mitoribosomal-subunit proteome & original description: pacid=50568120 polypeptide=Ceric.36G065300.1.p locus=Ceric.36G065300 ID=Ceric.36G065300.1.v2.1 annot-version=v2.1


Gene families : OG0004500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004500_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.36G065300.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00183630 NFD1,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT4G30930 NFD1 Ribosomal protein L21 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001371.5 No alias 50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre09.g388550 NFD1 No description available 0.07 OrthoFinder output from all 47 species
Dcu_g14758 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Gb_38840 NFD1 component mtRPL21 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g08614 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_747819g0010 NFD1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g04500.1 NFD1 component mtRPL21 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Nbi_g34048 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002071 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sam_g13356 No alias component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g13357 No alias component *(bL21m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc02g078200.4.1 NFD1, Solyc02g078200 component mtRPL21 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Tin_g21386 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e032388_P001 NFD1, Zm00001e032388 component mtRPL21 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR028909 L21p-like 151 251
No external refs found!