Solyc08g006500.3.1 (Solyc08g006500.3)


Aliases : Solyc08g006500.3

Description : 30.1 signalling.in sugar and nutrient physiology member of Putative ligand-gated ion channel subunit family glutamate receptor 2.8 (GLR2.8)


Gene families : OG_01_0000041 (Gene family) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g006500.3.1
Cluster HCCA cluster: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G05200 GLUR3, GLR3.4, ATGLR3.4 glutamate receptor 3.4 0.03 Gene family
AT2G24720 GLR2.2, ATGLR2.2 glutamate receptor 2.2 0.04 Gene family
AT2G29100 ATGLR2.9, GLR2.9 glutamate receptor 2.9 0.06 Gene family
AT2G29110 GLR2.8, ATGLR2.8 glutamate receptor 2.8 0.02 Gene family
AT2G29120 GLR2.7, ATGLR2.7 glutamate receptor 2.7 0.05 Gene family
AT2G32390 ATGLR3.5, GLR6, GLR3.5 glutamate receptor 3.5 0.03 Gene family
AT3G04110 ATGLR1.1, GLR1.1, GLR1 glutamate receptor 1.1 0.02 Gene family
AT4G31710 GLR2.4, ATGLR2.4 glutamate receptor 2.4 0.04 Gene family
AT5G11180 ATGLR2.6, GLR2.6 glutamate receptor 2.6 0.05 Gene family
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.05 Gene family
AT5G27100 GLR2.1, ATGLR2.1 glutamate receptor 2.1 0.03 Gene family
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.05 Gene family
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.03 Gene family
GSVIVT01014251001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.01 Gene family
GSVIVT01021155001 No alias 30.1 signalling.in sugar and nutrient physiology Encodes... 0.03 Gene family
GSVIVT01022297001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
GSVIVT01030602001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
GSVIVT01033121001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.01 Gene family
GSVIVT01033133001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
GSVIVT01033137001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.05 Gene family
GSVIVT01033150001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
GSVIVT01033155001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.03 Gene family
GSVIVT01033160001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
GSVIVT01033163001 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.03 Gene family
LOC_Os02g54640 Os02g0787600 30.1 signalling.in sugar and nutrient physiology member... 0.03 Gene family
LOC_Os09g26144 Os09g0431100 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
MA_101552g0010 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.04 Gene family
MA_10428521g0010 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
MA_10429132g0010 No alias 30.1 signalling.in sugar and nutrient physiology Encodes... 0.01 Gene family
MA_23282g0010 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.01 Gene family
MA_32301g0010 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
MA_339780g0010 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.03 Gene family
MA_3635444g0010 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.03 Gene family
MA_391859g0010 No alias 30.1 signalling.in sugar and nutrient physiology Encodes... 0.03 Gene family
MA_88153g0010 No alias 30.1 signalling.in sugar and nutrient physiology Encodes... 0.03 Gene family
MA_9039812g0010 No alias 30.1 signalling.in sugar and nutrient physiology Encodes... 0.01 Gene family
MA_958834g0010 No alias 30.1 signalling.in sugar and nutrient physiology Encodes... 0.02 Gene family
MA_9796468g0010 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.05 Gene family
Solyc06g063180.2.1 Solyc06g063180.2 30.1 signalling.in sugar and nutrient physiology member... 0.06 Gene family
Solyc06g063210.3.1 Solyc06g063210.3 30.1 signalling.in sugar and nutrient physiology member... 0.03 Gene family
Solyc07g052390.3.1 Solyc07g052390.3 30.1 signalling.in sugar and nutrient physiology Glr5... 0.02 Gene family
Zm00001d005783 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.03 Gene family
Zm00001d018329 GRMZM2G391487 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family
Zm00001d052064 No alias 30.1 signalling.in sugar and nutrient physiology member... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 555 831
IPR001828 ANF_lig-bd_rcpt 63 414
IPR001320 Iontro_rcpt 832 861
No external refs found!