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  5. Ceric.36G032100.1

Ceric.36G032100.1 (RUB1, ATRUB1, NEDD8,...)


Aliases : RUB1, ATRUB1, NEDD8, Ceric.36G032100

Description : RUB ubiquitin-fold protein & original description: pacid=50568069 polypeptide=Ceric.36G032100.1.p locus=Ceric.36G032100 ID=Ceric.36G032100.1.v2.1 annot-version=v2.1


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.36G032100.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g10801 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene08341.t1 UBQ11, Aspi01Gene08341 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15004 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.27G040600.1 Ceric.27G040600 component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dac_g08496 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dac_g17740 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
LOC_Os01g22490.1 UBQ6, LOC_Os01g22490 component RPS27a of SSU proteome 0.03 OrthoFinder output from all 47 species
Lfl_g23474 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g23519 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02418 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014510 UBQ6 not classified & original description: CDS=1-258 0.01 OrthoFinder output from all 47 species
Smo19615 No alias Polyubiquitin 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g51055 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24678 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021401_P001 UBQ11, Zm00001e021401 Polyubiquitin 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!