Solyc08g006040.3.1 (Solyc08g006040.3)

Aliases : Solyc08g006040.3

Description : protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6 Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis. ribosomal protein S6 (RPS6)

Gene families : OG_01_0002789 (Gene family) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g006040.3.1
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT4G31700 RPS6A, RPS6 ribosomal protein S6 0.26 Gene family
AT5G10360 EMB3010, RPS6B Ribosomal protein S6e 0.24 Gene family
Cpa|evm.model.tig00000704.73 No alias protein.synthesis.ribosomal... 0.21 Gene family
Cre09.g400650 No alias protein.synthesis.ribosomal... 0.14 Gene family
GSVIVT01009072001 No alias protein.synthesis.ribosomal... 0.1 Gene family
GSVIVT01015776001 No alias protein.synthesis.ribosomal... 0.07 Gene family
LOC_Os03g27260 Os03g0390000 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os07g42950 Os07g0622100 protein.synthesis.ribosomal... 0.17 Gene family
MA_10426804g0010 No alias protein.synthesis.ribosomal... 0.06 Gene family
MA_72828g0010 No alias protein.synthesis.ribosomal... 0.06 Gene family
Smo172795 PACid_15414360 protein.synthesis.ribosomal... 0.13 Gene family
Zm00001d006899 GRMZM5G851698 protein.synthesis.ribosomal... 0.17 Gene family
Zm00001d022180 GRMZM2G054136 protein.synthesis.ribosomal... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001377 Ribosomal_S6e 1 128
No external refs found!