Ceric.36G013000.1 (ATPRFB, HCF109,...)


Aliases : ATPRFB, HCF109, Ceric.36G013000

Description : translation peptide chain release factor *(PrfB) & original description: pacid=50568415 polypeptide=Ceric.36G013000.1.p locus=Ceric.36G013000 ID=Ceric.36G013000.1.v2.1 annot-version=v2.1


Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.36G013000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00184560 ATPRFB, HCF109,... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT5G36170 ATPRFB, HCF109 high chlorophyll fluorescent 109 0.03 OrthoFinder output from all 47 species
Ala_g01893 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Als_g37106 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0252.g060375 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Cre01.g010864 ATPRFB, HCF109 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dcu_g09191 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.06 OrthoFinder output from all 47 species
Ehy_g09038 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01019055001 ATPRFB, HCF109 Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Lfl_g12599 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
MA_10437191g0010 ATPRFB, HCF109 PrfB-type translation peptide chain release factor 0.03 OrthoFinder output from all 47 species
Pir_g63203 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species
Sam_g51819 No alias translation peptide chain release factor *(PrfB) &... 0.04 OrthoFinder output from all 47 species
Solyc04g025290.4.1 ATPRFB, HCF109,... PrfB-type translation peptide chain release factor 0.05 OrthoFinder output from all 47 species
Spa_g09555 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEA Interproscan
BP GO:0006415 translational termination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005139 PCRF 117 307
IPR000352 Pep_chain_release_fac_I 318 426
No external refs found!