Aliases : ATRABA5C, ARA4, ARA-4, RABA5C, ATRAB11F
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G73640 | RABA6a, AtRABA6a | RAB GTPase homolog A6A | 0.04 | OrthoFinder output from all 47 species | |
Adi_g025558 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g081036 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g20651 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g11161 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g47730.1 | AtRABA1f,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g54590.1 | ATRABA1B, RAB11,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g01480.1 | ATRABA2A,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g20050.1 | RAB-A2C,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g44070.1 | ATRABA1B, RAB11,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g15790.1 | AtRABA1f,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Msp_g04684 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g15033 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g27361 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g10152 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0034.g011299 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: CDS=186-836 | 0.03 | OrthoFinder output from all 47 species | |
Smo442026 | ATRABA5C, ARA4,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g012460.3.1 | AtRABA5a,... | A-class RAB GTPase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e033825_P001 | AtRABA1f,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e037250_P001 | ATHSGBP, RABA1d,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 11 | 171 |
No external refs found! |