Ceric.35G063800.1 (RAN3, ATRAN3, Ceric.35G063800)

Aliases : RAN3, ATRAN3, Ceric.35G063800

Description : GTPase *(Ran) & original description: pacid=50581751 polypeptide=Ceric.35G063800.1.p locus=Ceric.35G063800 ID=Ceric.35G063800.1.v2.1 annot-version=v2.1

Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.35G063800.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
Adi_g042368	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0094.g043417	RAN2	GTPase *(Ran) & original description: CDS=291-938	0.06	OrthoFinder output from all 47 species
Azfi_s0147.g053043	RAN2	GTPase *(Ran) & original description: CDS=1-873	0.16	OrthoFinder output from all 47 species
Azfi_s0548.g076431	RAN2	GTPase *(Ran) & original description: CDS=1-873	0.16	OrthoFinder output from all 47 species
Cba_g09240	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g45894	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g59260	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.22	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
Cre03.g191050	RAN1, RAN-1, ATRAN1	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Dac_g44710	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g08971	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07410	RAN2	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Gb_30495	RAN3, ATRAN3	Ran GTPase	0.03	OrthoFinder output from all 47 species
Lfl_g22288	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.05	OrthoFinder output from all 47 species
MA_10427158g0010	RAN2	Ran GTPase	0.03	OrthoFinder output from all 47 species
MA_28412g0010	RAN2	Ran GTPase	0.04	OrthoFinder output from all 47 species
Msp_g02691	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.06	OrthoFinder output from all 47 species
Msp_g36246	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g00842	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g19307	No alias	GTPase *(Ran) & original description: none	0.07	OrthoFinder output from all 47 species
Smo270966	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Solyc01g104700.4.1	RAN2, Solyc01g104700	Ran GTPase	0.02	OrthoFinder output from all 47 species
Solyc05g023800.3.1	RAN2, Solyc05g023800	Ran GTPase	0.04	OrthoFinder output from all 47 species
Spa_g05239	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.13	OrthoFinder output from all 47 species
Spa_g05240	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24079	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47199	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.08	OrthoFinder output from all 47 species
Tin_g01491	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	164

External Links

No external refs found!

Ceric.35G063800.1 (RAN3, ATRAN3, Ceric.35G063800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation