Ceric.35G046000.1 (OBP4, Ceric.35G046000)

Aliases : OBP4, Ceric.35G046000

Description : transcription factor *(DOF) & original description: pacid=50581355 polypeptide=Ceric.35G046000.1.p locus=Ceric.35G046000 ID=Ceric.35G046000.1.v2.1 annot-version=v2.1

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.35G046000.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00210070	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00059p00213350	ADOF1, DOF1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00160p00038440	HCA2, DOF5.6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.03	OrthoFinder output from all 47 species
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.06	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Adi_g016055	TMO6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g09379	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.11G014800.1	Ceric.11G014800	transcription factor *(DOF) & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.12G042700.1	TMO6, Ceric.12G042700	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.1Z138100.1	Ceric.1Z138100	transcription factor *(DOF) & original description:...	0.08	OrthoFinder output from all 47 species
Dde_g05737	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01016538001	OBP3	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Gb_20867	CDF3	Cyclic dof factor 3 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
LOC_Os02g49440.1	ADOF1, DOF1,...	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
LOC_Os04g47990.1	LOC_Os04g47990	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os12g38200.1	LOC_Os12g38200	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
MA_18267g0010	HCA2, DOF5.6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Ore_g33574	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g115940.4.1	CDF3, Solyc03g115940	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g150130.1.1	OBP4, Solyc06g150130	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc10g086440.2.1	DOF2.4,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc11g066050.1.1	Solyc11g066050	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc11g072500.2.1	TMO6, Solyc11g072500	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e002951_P002	Zm00001e002951	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e004476_P002	Zm00001e004476	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e007228_P002	Zm00001e007228	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e011750_P002	Zm00001e011750	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e012824_P001	CDF1, Zm00001e012824	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e018163_P001	Zm00001e018163	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e023334_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e029641_P001	OBP3, Zm00001e029641	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	53	109

External Links

No external refs found!

Ceric.35G046000.1 (OBP4, Ceric.35G046000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation