Ceric.35G034700.1 (TAF4, TAF4B, Ceric.35G034700)

Aliases : TAF4, TAF4B, Ceric.35G034700

Description : component *(TAF4) of TFIId basal transcription regulation complex & original description: pacid=50581519 polypeptide=Ceric.35G034700.1.p locus=Ceric.35G034700 ID=Ceric.35G034700.1.v2.1 annot-version=v2.1

Gene families : OG0002362 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002362_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.35G034700.1
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Aev_g38215	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.04	OrthoFinder output from all 47 species
Als_g10535	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.03	OrthoFinder output from all 47 species
Aob_g22118	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.02	OrthoFinder output from all 47 species
Aob_g42043	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.07	OrthoFinder output from all 47 species
Aop_g08190	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.04	OrthoFinder output from all 47 species
Cre02.g095800	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dcu_g42653	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.04	OrthoFinder output from all 47 species
GSVIVT01009365001	TAF4, TAF4B	RNA biosynthesis.RNA polymerase II-dependent...	0.06	OrthoFinder output from all 47 species
LOC_Os02g43750.1	TAF4, TAF4B,...	component TAF4 of TFIId basal transcription regulation complex	0.02	OrthoFinder output from all 47 species
MA_168127g0010	TAF4, TAF4B	component TAF4 of TFIId basal transcription regulation complex	0.02	OrthoFinder output from all 47 species
Mp2g09230.1	TAF4, TAF4B	component TAF4 of TFIId basal transcription regulation complex	0.05	OrthoFinder output from all 47 species
Zm00001e016810_P001	TAF4, TAF4B,...	component TAF4 of TFIId basal transcription regulation complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005669	transcription factor TFIID complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
CC	GO:0016593	Cdc73/Paf1 complex	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022003	RST	148	210
IPR007900	TAF4_C	421	734

External Links

No external refs found!

Ceric.35G034700.1 (TAF4, TAF4B, Ceric.35G034700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation