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  5. Ceric.34G061500.1

Ceric.34G061500.1 (emb1644, Ceric.34G061500)


Aliases : emb1644, Ceric.34G061500

Description : component *(LSm4) of U6-associated LSm accessory ribonucleoprotein complex & original description: pacid=50623125 polypeptide=Ceric.34G061500.1.p locus=Ceric.34G061500 ID=Ceric.34G061500.1.v2.1 annot-version=v2.1


Gene families : OG0005093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.34G061500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00214370 emb1644,... RNA processing.RNA splicing.U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000480.60 emb1644 RNA processing.RNA splicing.U6-associated LSm accessory... 0.01 OrthoFinder output from all 47 species
Cre06.g251300 emb1644 RNA processing.RNA splicing.U6-associated LSm accessory... 0.04 OrthoFinder output from all 47 species
Tin_g12470 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Zm00001e017261_P001 emb1644, Zm00001e017261 component LSm4 of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 6 70
No external refs found!