1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.34G005600.1

Ceric.34G005600.1 (RECQI1, Ceric.34G005600)


Aliases : RECQI1, Ceric.34G005600

Description : not classified & original description: pacid=50623064 polypeptide=Ceric.34G005600.1.p locus=Ceric.34G005600 ID=Ceric.34G005600.1.v2.1 annot-version=v2.1


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.34G005600.1

Target Alias Description ECC score Gene Family Method Actions
AT1G10930 ATRECQ4A, ATSGS1, RECQ4A DNA helicase (RECQl4A) 0.04 OrthoFinder output from all 47 species
Azfi_s0084.g039062 RECQI1 not classified & original description: CDS=1-2043 0.03 OrthoFinder output from all 47 species
Azfi_s0087.g042358 ATRECQ4A, ATSGS1, RECQ4A helicase component *(RecQ4A) of RTR Holliday junction... 0.04 OrthoFinder output from all 47 species
Cba_g15655 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.26 RecQl3, ATRECQ3 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre04.g219750 ATRECQ4A, ATSGS1, RECQ4A Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
Dcu_g06356 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
GSVIVT01023325001 ATRECQ4A, ATSGS1, RECQ4A Cell cycle.mitosis and meiosis.meiotic... 0.1 OrthoFinder output from all 47 species
Gb_08699 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Gb_33079 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.03 OrthoFinder output from all 47 species
LOC_Os04g35420.1 ATRECQ4A,... helicase component RecQ4A of RTR Holliday junction... 0.05 OrthoFinder output from all 47 species
Len_g14718 ATRECQ4A, ATSGS1, RECQ4A helicase component *(RecQ4A) of RTR Holliday junction... 0.05 OrthoFinder output from all 47 species
Lfl_g31337 RECQI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435954g0010 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10436537g0010 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.09 OrthoFinder output from all 47 species
MA_30494g0010 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_361558g0010 ATRECQ4A, ATSGS1, RECQ4A ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp4g14290.1 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.04 OrthoFinder output from all 47 species
Msp_g14824 RecQl3, ATRECQ3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41299 RECQI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48732 RecQl3, ATRECQ3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo41328 RecQl3, ATRECQ3 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g100280.4.1 RECQI1, Solyc01g100280 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc01g103960.3.1 ATRECQ4A,... helicase component RecQ4A of RTR Holliday junction... 0.05 OrthoFinder output from all 47 species
Solyc07g042010.4.1 RecQl3, ATRECQ3,... ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g074600.4.1 MED34, ATRECQ2,... component MED34 of MEDIATOR transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Spa_g29917 RECQI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 453 558
IPR011545 DEAD/DEAH_box_helicase_dom 245 414
IPR032284 RecQ_Zn-bd 571 640
No external refs found!