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  5. Ceric.32G067600.1

Ceric.32G067600.1 (CHA19, CHR19, ETL1,...)


Aliases : CHA19, CHR19, ETL1, Ceric.32G067600

Description : ATPase component *(Etl1) & original description: pacid=50597709 polypeptide=Ceric.32G067600.1.p locus=Ceric.32G067600 ID=Ceric.32G067600.1.v2.1 annot-version=v2.1


Gene families : OG0005169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.32G067600.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g15061 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08541 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010282001 CHA19, CHR19, ETL1 Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Gb_18893 CHA19, CHR19, ETL1 chromatin remodeling factor (Etl1) 0.06 OrthoFinder output from all 47 species
Len_g03887 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02212 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18107 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021372 CHA19, CHR19, ETL1 ATPase component *(Etl1) & original description: CDS=159-2738 0.05 OrthoFinder output from all 47 species
Solyc02g014770.3.1 CHA19, CHR19,... chromatin remodeling factor (Etl1) 0.06 OrthoFinder output from all 47 species
Zm00001e007239_P001 CHA19, CHR19,... chromatin remodeling factor (Etl1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 280 605
IPR001650 Helicase_C 675 787
No external refs found!