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  5. Ceric.32G021500.1

Ceric.32G021500.1 (LHCB1.5, LHB1B2,...)


Aliases : LHCB1.5, LHB1B2, Ceric.32G021500

Description : component *(LHCb1/2/3) of LHC-II complex & original description: pacid=50597636 polypeptide=Ceric.32G021500.1.p locus=Ceric.32G021500 ID=Ceric.32G021500.1.v2.1 annot-version=v2.1


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.32G021500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00069220 LHCB1.5, LHB1B2,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AMTR_s00088p00153020 LHCB2.3, LHCB2,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00139960 LHCB5,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Adi_g023263 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g31527 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene28094.t1 LHCB2.2, LHCB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29501.t1 LHCB2.2, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene31128.t1 LHCB3*1, LHCB3,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene66566.t1 LHCB2.2, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g04468 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08707 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g21669 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g38988 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Cre03.g156900 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g29163 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dde_g48076 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01014439001 LHCB3*1, LHCB3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
LOC_Os01g41710.1 LHCB1.5, LHB1B2,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g39610.1 LHCB2.2, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g37550.1 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
LOC_Os11g13890.1 LHCB5, LOC_Os11g13890 component LHCb5 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Len_g23886 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Lfl_g08693 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Pp3c18_8100V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.02 OrthoFinder output from all 47 species
Pp3c21_3950V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.01 OrthoFinder output from all 47 species
Pp3c6_6830V3.1 LHCB2.2, LHCB2,... photosystem II light harvesting complex gene 2.1 0.02 OrthoFinder output from all 47 species
Ppi_g32552 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g39667 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g54860 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Solyc06g063370.3.1 LHCB5, Solyc06g063370 component LHCb5 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Tin_g23329 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e034922_P001 LHCB1.5, LHB1B2,... Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 232
No external refs found!