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  5. Ceric.32G009600.1

Ceric.32G009600.1 (Ceric.32G009600)


Aliases : Ceric.32G009600

Description : not classified & original description: pacid=50597331 polypeptide=Ceric.32G009600.1.p locus=Ceric.32G009600 ID=Ceric.32G009600.1.v2.1 annot-version=v2.1


Gene families : OG0000714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.32G009600.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Adi_g023966 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
Als_g08846 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.04 OrthoFinder output from all 47 species
Cba_g03134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g52490.1 LOC_Os03g52490 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.03 OrthoFinder output from all 47 species
MA_18236g0010 No alias component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.04 OrthoFinder output from all 47 species
Pir_g02473 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 19 76
No external refs found!