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  5. Ceric.31G060600.1

Ceric.31G060600.1 (Ceric.31G060600)


Aliases : Ceric.31G060600

Description : not classified & original description: pacid=50574962 polypeptide=Ceric.31G060600.1.p locus=Ceric.31G060600 ID=Ceric.31G060600.1.v2.1 annot-version=v2.1


Gene families : OG0012030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.31G060600.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g016407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008767 CRR22 not classified & original description: CDS=88-2217 0.02 OrthoFinder output from all 47 species
Cba_g75134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28375 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04192 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g10794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0174.g024530 No alias not classified & original description: CDS=116-2620 0.01 OrthoFinder output from all 47 species
Spa_g30813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 476 501
IPR002885 Pentatricopeptide_repeat 580 605
IPR002885 Pentatricopeptide_repeat 606 653
IPR002885 Pentatricopeptide_repeat 403 450
IPR002885 Pentatricopeptide_repeat 202 249
IPR002885 Pentatricopeptide_repeat 505 552
No external refs found!