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  5. Ceric.31G042200.1

Ceric.31G042200.1 (HTA2, Ceric.31G042200)


Aliases : HTA2, Ceric.31G042200

Description : histone *(H2A) & original description: pacid=50574126 polypeptide=Ceric.31G042200.1.p locus=Ceric.31G042200 ID=Ceric.31G042200.1.v2.1 annot-version=v2.1


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.31G042200.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g023256 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052169 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g052170 HTA10 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g04264 HTA13 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33279.t1 HTA2, Aspi01Gene33279 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48036.t1 HTA7, Aspi01Gene48036 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.26G005600.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50599432... 0.01 OrthoFinder output from all 47 species
Ceric.26G005800.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50599346... 0.01 OrthoFinder output from all 47 species
Dde_g15493 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20425 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002735001 RAT5, HTA1, ATHTA1 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder output from all 47 species
GSVIVT01002746001 RAT5, HTA1, ATHTA1 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
LOC_Os12g25120.1 HTA2, LOC_Os12g25120 histone (H2A) 0.02 OrthoFinder output from all 47 species
Lfl_g21938 HTA6 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g36619 HTA6 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
MA_130065g0010 HTA6 histone (H2A) 1.0 OrthoFinder output from all 47 species
MA_191819g0010 HTA2 histone (H2A) 0.01 OrthoFinder output from all 47 species
MA_213048g0010 HTA7 histone (H2A) 0.03 OrthoFinder output from all 47 species
Nbi_g06551 HTA7 histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026322 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: CDS=44-520 0.04 OrthoFinder output from all 47 species
Sam_g48398 No alias histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 17 92
IPR032454 Histone_H2A_C 95 129
No external refs found!